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교수소개

한상진
  • 분야

    동물생리학, 생체주기학, 생태학

  • 성명

    국문 한상진

  • 직위

    생명과학부(생물학전공) / 교수

  • 연구실

  • 연락처

    (033) 248-2094

  • 이메일

학력

1972. 3. ~ 1976. 2. 이화여자대학교 생물학과(학사)
1978. 3. ~ 1983. 2. 독일 튜빙겐대학교 생물학과(Diplom)
1983. 3. ~ 1986. 2. 독일 튜빙겐대학교 생물학과(Ph. D.)

 

주요경력

1983. 4. ~ 1986. 8. 독일 튜빙겐대학교 연구원
1987. 3. ~ 1991. 3. 한림대학 생물학과 조교수
1991. 4. ~ 1996. 3. 한림대학교 자연과학대학 생물학과 부교수
1996. 4. ~ 현재 한림대학교 자연과학대학 생명과학부 교수

 

연구 및 저서

■ 논문
- "Diversion of locomotor activity rhythm and neural control Azadirachtin in Leucophaea maderae", 동물학회지, 1988.10
- "저준위 방사능이 Neurospora crassa의 리듬에 미치는 영향", 발암원학회지, 1991.3
- "LiCl이 Goldhamster의 빛민감성과 활동주기에 미치는 영향", 동물학회지, 1992.10
- "방사선물질 Li+, Rb+, Cs+이 Neurospora crassa의 성장 일주기에 미치는 영향", 한국독성학회지, 1993.4
- "Neurospora crassa의 포자형성주기에 미치는 빛-파장과 중금속이온의 영향관계 조사", 한국환경독성학회지, 11, 1995.
- "Melatonin and other Methoxyindoles in Yeast, Saccharomyces cereviside", Journal of Uni Goettingen, 1996.
- "Circardian Locomotor Activity of Musca Flies: Effects of 50 and 100Hz Squarewave Electric Fields", Bioelectromagnetics, 18, 1997.
 
■ 저작
- 바이오 리듬의 규명과 응용, 아카데미서적, 1993.8.

기타

■ 연구분야

- 동물생리학, 생체주기학, 생태학 

김영동
  • 분야

    식물다양성

  • 성명

    국문 김영동

  • 직위

    교수

  • 연구실

    생명과학관 8310호

  • 연락처

    033-248-2095

  • 이메일

학력

서울대학교 식물학과 학사 (식물학 전공) 
서울대학교 대학원 식물학과 석사 (식물분류학 전공) 
University of Texas, at Austin 대학원 식물학과 박사 (식물분자계통학 전공) 

주요경력

한국식물분류학회지 편집위원장 

연구 및 저서

■ 연구 및 저서(최근 5년)
- Seong-Hyun Cho, Bo-Yun Kim, Han-Sol Park, Chhang Phourin, Young-Dong Kim (2017) Impatiens bokorensis (Balsaminaceae), a new species from Cambodia. PhytoKeys 77(1):33-39.
- Bo-Yun Kim, Han-Sol Park, Soonok Kim, and Young-Dong Kim (2017) Development of microsatellite markers for Viscum coloratum (Santalaceae) and their applicationto wild populations. Applicationsin Plant Sciences 5(1): 1600102.
- Homervergel G. Ong, Young-Dong Kim (2017) The role of wild edible plants in household food security among transitioning hunter-gatherers: evidence from the Philippines. Food Security 9(1): 11-24.
- Sang-Hun Oh, Jung-Won Youm, Yong-In Kim, and Young-Dong Kim (2016) Phylogeny and Evolution of Endemic Species on Ulleungdo Island, Korea: The Case of Fagus multinervis (Fagaceae). Systematic Botany 41(3): 617-625.
- Seong-Hyun Cho, Jung-Hoon Lee, Dae-Hyun Kang, Bo-Yun Kim, Khin Myo Htwe, Annatrias-Blasi (2016) Cissus erecta (Vitaceae), a new non-vinyherbaceous species from Mt. Popa, Myanmar. Phytotaxa 260(3): 291-295.
- Won Kyun Im, Hyun Jung Park, Kwang Soo Lee, Jung Hoon Lee, Young Dong Kim, Kyeong-Hee Kim, Sang-Jae Park, Seokmann Hong, and Sung Ho Jeon (2016) Fisetin-Rich Extracts of Rhus verniciflua Stokes Improve Blood Flow Rates in Mice Fed Both Normal and High-Fat Diets. Journal of Medicinal Food 19(2): 120-126.
- 김영동(2016) 생물의 분류에 대한 분자계통학적 접근. 학문연구의 동향과 쟁점 5: 403-446.
- Yong-In Kim, Seong Hyun Cho, Bo-Yun Kim, Jung-Hoon Lee, Dae-Hyun Kang, Soonok Kim, Roman V. Doudkin and Young-Dong Kim (2015) A new combination for Saxifraga octopetala (Saxifragaceae) and its phylogenetic relationship. Korean Journal of Plant Taxonomy 45(4): 306-317.
- Jung-Hoon Lee, Kyunghee Kim, Na-Rae Kim, Sang-Choon Lee, Tae-Jin Yang & Young-Dong Kim (2015) The complete chloroplast genome of a medicinal plant Epimedium koreanum Nakai (Berberidaceae). Mitochondria DNA 27(6):4342-4343.
- Na-Rae Kim, Kyunghee Kim, Sang-Choon Lee, Jung-Hoon Lee, Seong-Hyun Cho, Yeisoo Yu, Young-Dong Kim & Tae-Jin Yang (2015) The complete chloroplast genomes of two Wisteria species, W. floribunda and W. sinensis (Fabaceae). Mitochondria DNA 27(6): 4353-4354.
- Seong-Hyun Cho, Jung-Hoon Lee, Hyosig Won, Chhang Phourin, Young-Dong Kim (2015) Sonerila bokorense (Melastomataceae), a new species from Cambodia. Phytotaxa 222(4): 295-299.
- Homervergel G. Ong, Jae-Min Chung, Hye-Ran Jeong, Young-Dong Kim, Kyung Choi, Chang-Ho Shin, You-Mi Lee (2015) Ethnobotany of the wild edible plants gathered in Ulleung Island, South Korea. Genetic Resources and Crop Evolution 63(3): 409-427.
- Kyunghee Kim, Sang-Choon Lee, Junki Lee, Yeisoo Yu, Kiwoung Yang, Beom-Soon Choi, Hee-Jong Koh, Nomar Espinosa Waminal, Hong-Il Choi, Nam-Hoon Kim, Woojong Jang, Hyun-Seung Park, Jonghoon Lee, Hyun Oh Lee, Ho Jun Joh, Hyeon Ju Lee, Jee Young Park, Sampath Perumal, Murukarthick Jayakodi, Yun Sun Lee, Backki Kim, Dario Copetti, Soonok Kim, Sunggil Kim, Ki-Byung Lim, Young-Dong Kim, Jungho Lee, Kwang-Su Cho, Beom-Seok Park, Rod A. Wing, Tae-Jin Yang (2015) Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Scientific Reports 5: 8.
- Mila Jung, Janggyoo Choi, Hee-Sung Chae, Jae Youl Cho, Young-Dong Kim, Khin Myo Htwe, Woo-Shin Lee, Young-Won Chin, Jinwoong Kim, Kee Dong Yoon (2015) Flavonoids from Symplocos racemosa. Molecules 20: 358-365.
- Homervergel G. Ong and Young-Dong Kim (2015) Herbal Therapies and Social-Health Policies: Indigenous Ati Negrito Women's Dilemma and Reproductive Healthcare Transitions in the Philippines. Evidence-Based Complementary and Alternative Medicine 2015: 491209.
- Janggyoo Choi, Jae Youl Cho, Soo Jung Choi, Heejin Jeon, Young Dong Kim, Khin Myo Htwe, Young Won Chin, Woo Shin Lee, Jinwoong Kim and Kee Dong Yoon (2015) Two New Phenolic Glucosides from Lagerstroemia speciosa. Molecules 20: 4483-4491.
- Yong-In Kim and Young-Dong Kim (2014) Chrysosplenium aureobracteatum (Saxifragaceae), a New Species from South Korea. NOVON 23(4): 432-436.
- Homervergel G. Ong, Young-Dong Kim (2014) Quantitative ethnobotanical study of the medicinal plants used by the Ati Negrito indigenous group in Guimaras Island, Philippines. Journal of Ethnopharmacology 157: 228-242.
- Eunji Kim, Kee Dong Yoon, Woo-Shin Lee, Woo Seok Yang, Shi Hyoung Kim, Nak Yoon Sung, Kwang-Soo Baek, Yong Kim, Khin Myo Htwe, Young-Dong Kim, Sungyoul Hong, Jong-Hoon Kim, Jae Youl Cho (2014) Syk/Src-targeted anti-inflammatory activity of Codariocalyx motorius ethanolic extract. Journal of Ethnopharmacology 155: 185-193.
- Hyunchur Shin, Sang-Hun Oh, Yongseok Lim, Chang-Woo Hyun, Seong-Hyun Cho, Yong-In Kim, Young-Dong Kim (2014) Molecular Evidence for Hybrid Origin of Aster chusanensis, an Endemic Species of Ulleungdo, Korea. Journal of Plant Biology 57: 174-185.
- Woo Seok Yang, Deok Jeong, Young-Su Yi, Byoung-Hee Lee, Tae Woong Kim, Khin Myo Htwe, Young-Dong Kim, Kee Dong Yoon, Sungyoul Hong, Woo-Shin Lee, Jae Youl Cho (2013) Myrsine seguinii ethanolic extract and its active component quercetin inhibit macrophage activation and peritonitis induced by LPS by targeting to Syk/Src/IRAK-1. Journal of Ethnopharmacology. 151(1): 1165-1174.
- Na-Rae Kim, Yong-In Kim, Jung-Hoon Lee and Young-Dong Kim (2013) Genetic diversity of Millettia japonica in Korea as revealed by ISSR analysis. Korean Journal of Plant Taxonomy 43(4): 267-273.
- Woo Seok Yang, Byoung-Hee Lee, Shi Hyoung Kim, Han Gyung Kim, Young-Su Yi, Khin Myo Htwe, Young-Dong Kim, Ki Dong Yoon, Sungyoul Hong, Woo-Shin Lee, Jae Youl Cho (2013) Dipterocarpus tuberculatus ethanol extract strongly suppresses in vitro macrophage-mediated inflammatory responses and in vivo acute gastritis. Journal of Ethnopharmacology. 146(3): 873-880

 

기타

■ 주요 연구주제 
- 식물의 유전정보 분석을 통한 계통분류 및 신종 발굴 
- 분자마커를 이용한 한국 주요 식물의 동정 
- 한국 및 동남아시아(캄보디아, 미얀마) 식물상 
- 희귀식물의 보전을 위한 집단유전학적 연구 
- 동아시아 약용 및 식용 식물의 전통지식 분석 

 

전성호
  • 분야

    분자면역학

  • 성명

    국문 전성호

  • 직위

    교수

  • 연구실

    생과학관 8313호

  • 연락처

    033-248-2096

  • 이메일

학력

1986 ~ 1990 서울대학교 동물학과 학사 (생물학 전공)

1990 ~ 1992 서울대학교 분자생물학과 석사(세포생물학 전공)

1992 ~ 1998 서울대학교 분자생물학과 박사(분자면역학 전공)

주요경력

1998 ~ 1999 서울대학교 세포분화연구센터 박사후연구원

2000 ~ 2001 이스라엘 와이즈만 연구소 박사후연구원

2002 ~ 2003 미국 마운트사이나이 병원 박사후연구원

2003 ~ 2005 서울대학교 BK21 사업단 연구교수

2005 ~ 현재 한림대학교 생명과학과 교수

2012 ~ 현재 한림대학교 창업보육센터 센터장

연구 및 저서

■ 논문
- Fisetin-rich extracts of Rhus verniciflua stokes improve blood flow rates in mice fed both normal and high-Fat diets. 2016. J Med Food. 19(2):120-6.
- IL32γ activates natural killer receptor-expressing innate immune cells to produce IFNγ via dendritic cell-derived IL12. 2015. Biochem Biophys Res Commun.461(1):86-94.
- The HIF-1/glial TIM-3 axis controls inflammation associated brain damage under hypoxia. 2015. Nat Commun.6:6340. doi: 10.1038/ncomms7340.
- Nanobody-targeted E3-ubiquitin ligase complex degrades nuclear proteins. 2015. Sci Rep.5:14269.
- Application of in utero electroporation of G-protein coupled receptor (GPCR) genes, for subcellular localization of hardly identifiable GPCR in mouse cerebral cortex. 2014. Mol cells.37(7):554-561.
- nc886, a non-coding RNA of anti-proliferative role, is suppressed by CpG DNA methylation in human gastric cancer. 2014. Oncotarget5(11):3944-3955.
- TopBP1 deficiency impairs V(D)J recombination during lymphocyte development. 2014. EMBO J. 33(3):217-228.
- Cell death/proliferation roles for nc886, a non-coding RNA, in the protein kinase R pathway in cholangiocarcinoma. 2013. Oncogene32(32):3722-31.
- Compartmentalized, functional role of angiogenin during spotted fever group rickettsia-induced endothelial barrier dysfunction: evidence of possible mediation by host tRNA-derived small noncoding RNAs. 2013. BMC Infect Dis.23;13:285.
- Involvement of the cAMP response element binding protein, CREB, and Cyclin D1 in LPA-induced proliferation of P19 embryonic carcinoma cells. 2012. Mol cells.34(3):323-328.
- A tumor surveillance model: A non-coding RNA senses neoplastic cells and its protein partner signals cell death. 2012. Int. J. Mol. Sci.13(10):13134-13139.
- Characterization of the direct physical interaction of nc886, a cellular non-coding RNA, and PKR. 2012. FEBS Lett.586(19):3477-3484.
- DNA Aptamers against the Receptor Binding Region of Hemagglutinin Prevent Avian Influenza Viral Infection. 2011. Mol. cells32(6):527-533.
- Activation of natural killer T cells inhibits the development of induced regulatory T cells via IFNγ. 2011. Biochem. Biophys. Res. Commun..411(3):599-606.
- Gold nanoparticle-based colorimetric detection of kanamycin using a DNA aptamer. 2011. Anal. Biochem.415(2):175-81.
- Precursor miR-886, a novel noncoding RNA repressed in cancer, associates with PKR and modulates its activity. 2011. RNA 17(6):1076-89.
- Galectin-3 exerts cytokine-like regulatory actions through the JAK-STAT pathway. 2010. J Immunol.185(11):7037-46.
- Twist2 regulates CD7 expression and galectin-1-induced apoptosis in mature T-cells. 2009. Mol Cells.28(6):553-558.
- The Effect of CD28 Stimulation on in vitro Generation of Regulatory T Cells with IL2 and TGFβ. 2008. GENES &GENOMICS. 30(6): 555-561.
- Down-Regulation of the SWI/SNF Chromatin Remodeling Activity by TCR Signaling Is Required for Proper ThymocyteMaturation. 2007. J Immunol.178(11):7088-96.
- SRG3 interacts directly with the major components of the SWI/SNF chromatin remodeling complex and protects them from proteasomal degradation. 2007. J Biol Chem.282(14):10614-24.
- Notch1 Confers Thymocytes a Resistance to GC-induced Apoptosis via Deltex1 by Blocking the Recruitment of p300 to E2A/HEB and Regulating the SRG3 Expression. 2006. Cell death differ.13:1495-1505.
- Expression of SRG3, a Core Component of Mouse SWI/SNF Chromatin Remodeling Complex, Is Regulated by Cooperative Interactions between Sp1/Sp3 and Ets Transcription Factors. 2005. Biochem. Biophys. Res. Commun. 338:1435-1446.
- Ecto-and exo-protein kinases in Schistosoma mansoni: regulation of surface phosphorylation by acetylcholine and identification of the alpha subunit of CKII as a major secreted protein kinase. 2005. J. Parasitol. 91:756-63.
- Modulation of androgen receptortransactivation by the SWI3-related gene product (SRG3) in multiple ways. 2005. Mol. Cell Biol. 25(12) 4841-4852.
- A DNA aptamer prevents influenza infection by blocking the receptor binding region of the viral haemagglutinin. 2004. J. Biol.Chem.279(46): 48410-48419.
- Nitric oxide inhibits glucocorticoid-induced apoptosis oft hymocytes by down-regulating the SRG3 expression. 2004. J. Biol.Chem. 279(33): 34373-34379.
- E2A/HEB and Id3 proteins control the sensitivity to glucocorticoid-induced apoptosis in thymocytes by regulating the SRG3 expression. 2004. J. Biol. Chem. 279(21): 21916-23.
- T-cell receptor signaling inhibits glucocorticoid-induced apoptosis by repressing the SRG3 expression via Ras activation. 2004. J. Biol. Chem. 279(21): 21903-15.
- Twist2, a novel ADD1/SREBP1c interacting protein, represses the transcriptional activity of ADD1/SREBP1c. 2003. Nucleic Acids Res.31(24):7165-74.
- Overexpression of SRG3/SWI3 protein disrupts the cell cycle progression in mature T cells and yeast. 2002. Korean J. Biol.Sci. 6:335-339.
- Intranasal immunization with synthetic recombinant vaccine containing multiple epitopes of influenza virus. 2002. Vaccine20: 2772-2780.
- Immunization with Influenza Virus Hemagglutinin Globular Region Containing the Receptor-Binding Pocket. 2002. Viral Immunol. 15: 165-176.
- Notch1 confers developing thymocytes a resistance to glucocorticoid induced apoptosis by down-regulating SRG3 expression. 2001. Proc. Natl.Acad. Sci. U.S.A. 98:10267-72.
- Two species of mRNAs for the fyn proto-oncogene are produced by an alternative polyadenylation. 1998. Mol. &Cells8:746-749.
- Down-regulation of Tcf-1 expression by activation-induced apoptosis of T cell hybridoma. 1998. Korean J. Biol.Sci. 2:403-410.
- Expression of Tcf-1 mRNA and surface TCR/CD3 complexes are reduced during apoptosis of T-cells. 1998. Int. Immunol. 10:1519-1527.
- A new mouse gene, SRG3, related to the SWI3of Saccharomyces cerevisiae, is required for apoptosis induced by glucocorticoids in thymoma cell line. 1997. J. Exp. Med. 185:1827-1836.
- Overexpressed RAD4 protein required for excision repair of Saccharomyces cerevisiaeis toxic to the host Escherichia coli. 1994. In Vitro Toxicol. 7:269-275.
- Expression of RAD4gene of Saccharomyces cerevisiae that can be propagated in Escherichia coli without inactivation. 1993. Biochem. Biophys. Res. Commun. 193:191-197.
- The isolated RAD4gene required for nucleotide excision repair in Saccharomyces cerevisiaedose not contain a suppressor gene. 1990. Korean J. Genetics. 12:147-155.
 

■ 저서
- 세균과 세균바이러스의 유전학. 2015. 필수 유전학 6판. by D.L. Hartl (ed. 양재섭 외). chap. 7, pp 226-259. 바이오사이언스 출판
- 번역, 조절 RNA, 2014. 왓슨 분자생물학 7판 by J. Watson (ed. 양재섭 외). chap. 15, pp. 509-571; chap. 20, pp. 701-732 바이오사이언스 출판
- 세포생물학, 2014. by G. Plopper 범문 에듀케이션
- 전이. 2013. 분자생물학 5판 by R.F. Weaver, (ed. 최준호 외). chap. 23, pp. 677-701. 라이프사이언스
- 필수세포생물학 2판. 2003. by B.Alberts (ed. 박상대 외) 교보문고
- Apoptosis in immune system. 1998. 유전. 2: 129-146.
 

■ 특허
- DNA aptamers and their mixture for the prevention of infection and detection of avian influenza virus, H9N2. 2008. Korea 10-2008-0039199.
- Nucleic acid molecules, polypeptides, antibodies and compositions for treating and detecting influenza virus infection. 2010. US 7786279 B2
- DNA aptamer binding to kanamycin with specificity. 2010. Korea 10-1263450
- DNA aptamer binding to ampicillin with specificity. 2010. Korea 10-1258600
- DNA aptamer binding to sulfadimethoxine with specificity. 2010. Korea 10-1263449
- Functional health food composition using color food for anti-oxidative and anti-inflammatory effect and method for manufacturing the same. 2015. Korea 10-2015-0024442

기타

■ 학회활동
- 한국세포분자생물학회 재무위원
- 대한면역학회 정회원
- 한국유전학회 정회원


■ 주요 연구주제
- non-coding RNA에 의한 면역세포의 분화 및 암 조절 기전 연구: 단백질을 암호화하지 않는 비번역 RNA가 면역기능을 담당하는 대식세포의 분화와 활성 조절에 관여하는 신호전달과 유전자 발현에 중요한 조절자로서 기능할 가능성에 대한 연구. 이 RNA는 세포의 증식과 암세포의 발병과정에서도 중요한 역할을 한다는 것을 밝힘으로써, 항암 또는 면역질환의 치료제 발굴에 관한 단서를 제공함.
- 항-바이러스 치료제 및 백신 개발: 인플루엔자 바이러스 감염을 억제하는 치료제 및 백신 후보물질의 발굴과 관련된 연구
- 기능성 천연소재의 면역활성 효능평가 및 조절기전 분석: 국내외 다양한 식물에서 유래한 면역조절 후보물질의 효능평가를 통한 기능성 식품, 화장품, 면역조절 치료제 발굴과 관련된 연구

정동훈
  • 분야

    식물유전체학

  • 성명

    국문 정동훈

  • 직위

    생명과학과 조교수

  • 연구실

    생명과학관 8306호

  • 연락처

    033-248-2092

  • 이메일

학력

1998.03 ~ 2003.02 이학박사 포항공과대학교 생명과학과 
1996.03 ~ 1998.02 이학석사, 포항공과대학교 생명과학과 
1992.03 ~ 1996.02 이학사, 연세대학교 생물학과 

주요경력

2014.09 ~ 현재 조교수, 한림대학교 생명과학과 
2009.08 ~ 2014.08 Associate Scientist, University of Delaware 
2006.07 ~ 2009.08 박사후 연구원. University of Delaware 
2003.03 ~ 2006.07 박사후 연구원, 포항공과대학교 

연구 및 저서

■ 연구 및 저서

- Chung PJ, Jung H, JeongD-H,Ha SH, Choi YD, Kim JK. (2016) Transcriptome profiling of drought responsive noncoding RNAs and their target genes in rice. BMC Genomics.17: 563

-  Jeong D-H(2016) Functional diversity of microRNA variants in plants J. Plant Biol.59: 303-310

- Kim C-Y, Vo KTX, Nguyen CD, JeongD-H, Lee S-K, Kumar M, Kim S-R, Park S-H, Kim J-K, Jeon J-S. (2016) Functional analysis of a cold-responsive rice WRKY gene, OsWRKY71. Plant Biotechnology Reports.10:13-23

- Schmidt SA, Foley PL, JeongD-H, Rymarquis LA, Doyle F, Tenenbaum SA, Belasco JG,, and Green PJ. (2015) Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells. Nucleic Acids Res. 43: 309-323

-  Jeong D-H, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, De Paoli E, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, and Green PJ. (2013) Parallel analysis of RNA ends enhances global investigation of miRNAs and target RNAs of Brachypodium distachyon.Genome Biology 14:R145

-  Jeong D-H, and Green PJ. (2013) The role of rice microRNAs in abiotic stress responses. J. Plant Biol.56: 187-197 (review)

-  Jeong D-H*, Thatcher SR*, Brown RSH, Zhai J, Park S, Rymarquis LA, Meyers BC, and Green PJ. (2013)Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading and target cleavage. Plant Physiol.162:1225-1245 (*co-first authors)

-  Jeong D-H, and Green PJ. (2012) Methods for validation of miRNA sequence variants and the cleavage of their targets. Methods 58:135-143

- Song X, Li P, Zhai J, Zhou M, Liu B, Ma L, JeongD-H, Nakata M, Cao S, Liu C, Chu C, Wang X-J, Green PJ, Meyers BC, and Cao X.(2012) Role of DCL4 and DCL3b in rice phased small RNA biogenesis. Plant J. 69:462-474

-  Jeong D-H, Park S, Zhai J, Gurazada SGR, De Paoli E, Meyers BC, and Green PJ. (2011) Massive analysis of rice small RNAs: Mechanistic implication of regulated miRNAs and variants for differential target RNA cleavage. Plant Cell23: 4185-4207

- Zhai J, JeongD-H,De Paoli E,Park S,Rosen BD, Li Y, González AJ,Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC. (2011) microRNAs as Master Regulators of the Plant NB-LRR Defense Gene Family via the Production of Phased, Trans-acting siRNAs. Genes and Development25:1540

- Young ND, Debellé F, Oldroyd G, Geurts R, Cannon SB, Mayer KFX, Gouzy J, Van de Peer Y, Schoof H, Udvardi MK, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Proost S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Benedito VA, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Doyle JJ, Dudez A-M, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray S, JeongD-H,Jing Y, Jöcker A, Kenton SM, Kim D-J, Kathrin Klee, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun J-H, Najar FZ, Nicholson C, Noirot C, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Saurat O, Scarpelli C, Schiex T, Segurens B, Seigfried M, Severin A, Sherrier DJ, Shi R, Sims S, Sinharoy S, Sterck L, Vasylenko I, Viollet A, Wang K, Wang B-B, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA. (2011) The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses. Nature480:520-524

- Lee Y-S, JeongD-H, Lee D-Y, Yi J, Ryu C-H, Kim SL, Jeong HJ, Choi SC, Jin P, Yang J, Choi L-H, Choi H, and An G (2010) OsCOL4 is a constitutive flowering repressor upstream of Ehd1 and downstream of OsphyB. Plant J. 63:1830.

- Joshi T, Yan Z, Libault M, JeongD-H, Park S, Green PJ, Sherrier Dj, Farmer A, May G, Meyers BC, Xu D, Stacey G (2010) Prediction of novel miRNAs and associated target genes in Glycine max. BMC Bioinformatics11 (Suppl 1):S14.

기타

■ 주요 연구주제

- RNA Genomics: 차세대염기서열분석기술(Next Generation Sequencing technology)를이용하여small RNA 및mRNA와같은다양한전사체(transcriptome)를유전체수준에서연구함

- Crop Functional Genomics: 벼의꽃발달관여유전자및환경스트레스관련유전자의발굴과형질전환식물체개발을통한기능유전체연구를수행하고있음

- Post-transcriptional Gene Regulation: microRNA를포함한small RNA가전사후단계에서유전자발현을조절하는기작을연구하며, RNA degradome 분석을통한RNA 분해기작을주로연구함.

 

■ 학회활동

- 한국식물학회

- 한국유전학회

 

■ 수상

- 한국식물학회JPB 논문상(2016)

김봉수
  • 분야

    미생물학(마이크로바이옴)

  • 성명

    국문 김봉수

  • 직위

    생명과학과 조교수

  • 연구실

    생명과학관 8309호

  • 연락처

    033-248-2093

  • 이메일

학력

1997 ~ 2001 서울대학교 응용생물화학부 학사 
2001 ~ 2007 서울대학교 생명과학부 박사 

주요경력

2007 ~ 2008 서울대학교 미생물연구소 박사후연구원
2008 ~ 2011 미국 식약청 (US F.D.A.) 독성학연구소 박사후연구원
2011 ~ 2014 ㈜천랩 생물정보연구소 연구소장
2014 ~ 현재 한림대학교 생명과학과 조교수
2016 ~ 현재 미생물생명공학회지 편집위원

 

연구 및 저서

■ 논문
- Kim S, Lee MJ, Lee JJ, Choi SH, Kim BS. (2017) Analysis of microbiota of the swimming crab (Portunus trituberculatus) in South Korea to identify risk markers for foodborne illness. LWT-Food Science and Technology. 86, 483-491.
- Wang JH, Kim BS, Han K, Kim H. (2017) Ephedra-treated donor-derived gut microbiota tranplantation ameliorates high fat diet-induced obesity in rats. Interantional Journal of Environmental Research and Public health. 14(6), 555.
- Oh B, Kim JW, Kim BS. (2016) Changes in the functional potential of the gut microbiome following probiotic supplementation during Helicobacter pylori treatment. Helicobacter. 21(6): 493-503.
- Lee MJ, Lee JJ, Chung HY, Choi SH, Kim BS. (2016) Analysis of microbiota on abalone (Haliotis discus hannai) in South Korea for improved product management. International Journal of Food Microbiology. 234: 45-52.
- Yeom Y, Kim BS, Kim SJ, Kim Y. (2016) Sasa quelpaertensis leaf extract regulates microbial dysbiosis by modulating the composition and diversity of the microbiota in dextran sulfate sodium-induced colitis mice. BMC Complementary and Alternative Medicine. 16:481.
- Chung HY, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Jeong HG, Choi SH, Kim BS. (2016) Genome sequence of Bacillus cereus FORC_021, a food-borne pathogen isolated from a knife at a sashimi restaurant. Journal of Microbiology and Biotechnology. 26(12): 2030-2035.
- Sul WJ, Kim IS, Ekpeghere KI, Song B, Kim BS, Kim HG, Kim JT, Koh SC. (2016) Metagenomic insight of nitrogen metabolism in a tannery wastewater treatment plant bioaugmented with the microbial consortium BM-S-1. Journal of Environmental Science and Health. Part A. 51(13): 1164-1172.
- Lee E, Lee SY, Kang MJ, Kim K, Won S, Kim BJ, Choi KY, Kim BS, Cho HJ, Kim Y, Yang SI, Hong SJ. (2016) Clostridia in the gut and onset of atopic dermatitis via eosinophil inflammation. Annals of Allergy, Asthma & Immunology. 117(1):91-92.e1.
- Oh B, Kim JS, Kweon M, Kim BS, Huh IS. (2016) Six-week diet correction for body weight reduction and its subsequent changes of gut microbiota: a case report. Clinical Nutrition Research. 5: 137-140.
- Chung HY, Na EJ, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Choi SH, Kim BS. (2016) Complete genome sequence of Vibrio parahaemolyticus FORC_023 isolated from raw fish storage water. Pathogens and Diseases. 74(4): ftw032.
- Oh B, Kim BS, Kim JW, Kim JS, Koh SJ, Kim BG, Lee KL, Chun J. (2016) The effect of probiotics on gut microbiota during the Helicobacter pylori eradication: randomized controlled trial. Helicobacter. 21(3): 165-174.
- Han K, Bose S, Kim YM, Chin YW, Kim BS, Wang JH, Lee JH, Kim H. (2015) Rehmannia glutinosa reduced waist circumferences of Korean obese women possibly through modulation of gut microbiota. Food & Function. 6(8): 2684-2692.
- Oh HY, Kim BS, Seo SS, Kong JS, Lee JK, Park SY, Hong KM, Kim HK, Kim MK. (2015) The association of uterine cervical microbiota with an increased risk for cervical intraepithelial neoplasia in Korea. Clinical Microbiology and Infection 21(7): 674.e1-9.
- Yang S, Lim JS, Khan MA, Kim BS, Choi DY, Lee EY, Ahn H. (2015) High-throughput nucleotide sequence analysis of diverse bacterial communities in leachates of decomposing pig carcasses. Genetics and Molecular Biology. 38(3), 373-380.
- Lee SA, Lim JY, Kim BS, Cho SJ, Kim NY, Kim OB, Kim Y. (2015) Comparison of the gut microbiota profile in breast- and formula- fed Korean infants using pyrosequencing. Nutrition Research and Practice. 9(3):242-248.
- Han K, Bose S, Wang JH, Kim BS, Kim MJ, Kim EJ, Kim H. (2015) Contrasting effects of fresh and fermented kimchi consumption on gut microbiota composition and gene expression related to metabolic syndrome in obese Korean women. Molecular Nutrition & Food Research. 59(5), 1004-1008.
- Mo S, Kim BS, Yun SJ, Lee JJ, Yoon SH, Oh CH. (2015) Genome sequencing of Clostridium butyricum DKU-01, isolated from infant feces. Gut Pathogens.7:8.
- Kweon O, Kim SJ, Blom J, Kim SK, Kim BS, Baek DH, Park S, Sutherland JB, Cerniglia CE. (2015) Comparative functional pan-genome analyses to build connections between genomic dynamics and phenotypic evolution in polycyclic aromatic hydrocarbon metabolism in the genus Mycobacterium. BMC Evolutionary Biology. 15:21.
- Jeon YS, Park SC, Lim J, Chun J, Kim BS. (2015) Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform. Journal of Microbiology. 53 (1), 60-69.
- Park S, Song KM, Kim HJ, Kim BS, Rhee YK, Lee MK. (2014) Characterization and use of microbial communities in Doenjang to control the unpleasant odor of Ginkgo epicarp. Food Science and Biotechnology. 23(6), 1959-1964.
- Kim HJ, Kim MJ, Turner TL, Kim BS, Song KM, Yi SH, Lee MK. (2014) Pyrosequencing analysis of microbiota reveals that lactic acid bacteria are dominant in Korean flat fish fermented food, Gajami-sikhae. Bioscience, Biotechnology, and Biochemistry. 78(9), 1611-1618.
- Lee Y, Kim BS, Chun J, Yong JH, Lee YS, Yoo JS, Yong D, Hong SG, D’Souza R, Thomson KS, Lee K, Chong Y. (2014) Clonality and resistome analysis of KPC-producing Klebsiella pneumonia strain isolated in Korea using whole genome sequencing. Biomed Research International. 2014:352862.
- Song MY, Kim BS, Kim H. (2014) Influence of Panax ginseng on obesity and gut microbiota in obese middle-aged Korean women. Journal of Ginseng Research. 38(2), 106-115.
- Kim BS, Yi H, Chun J, Cha CJ. (2014) Genome sequence of type strain Staphylococcus aureus subsp. aureus. Gut Pathogens. 6:6.
- Kim BS, Song MY, Kim H. (2014) The anti-obesity effect of Ephedra sinica through modulation of gut microbiota in obese Korean women. Journal of Ethnopharmacology. 152 (3), 532-539.
- Jeon YS, Lee K, Park SC, Kim BS, Cho YJ, Ha SM, Chun J. (2014) EzEditor: A versatile sequence alignment editor for both ribosomal RNA and protein coding genes. International Journal of Systematic and Evolutionary Microbiology. 64(2), 689-691.
- Kim BS, Bae HS, Lim CY, Kim MJ, Kim JY, Kim JE, Kim H. (2013) Comparison of gut microbiota between Sasang constitutions. Evidence-Based Complementary and Alternative Medicine. Volume 2013, article ID 171643.
- Kim IS, Ekpeghere KI, Ha SY, Kim BS, Song B, Kim JT, Kim HG, Koh SC. (2013) Full-scale biological treatment of tannery wastewater using the novel microbial consortium BM-S-1. Journal of Environmental Science and Health, Part A. 49(3), 355-364.
- Hur M, Lee I, Tak BM, Lee HJ, Yu JJ, Cheon SU, Kim BS. (2013) Temporal shifts in cyanobacterial communities at different sites on the Nakdong River in Korea. Water Research. 47(19), 6973-6982.
- Kim M, Lee KH, Yoon SW, Kim BS, Chun J, Yi H. (2013) Analytical tools and databases for metagenomics in Next-Generation Sequencing era. Genomics & Informatics. 11(3), 102-113.
- Kim BS, Jeon YS, Chun J. (2013) Current status and future promise of the human microbiome. Pediatric Gastroenterology, Hepatology & Nutrition. 16 (2), 71-79.
- Kim IS, Ekpeghere KI, Ha SY, Kim SH, Kim BS, Song B, Chun J, Chang JS, Kim HG, Koh SC. (2013) An eco-friendly treatment of tannery wastewater by bioaugmentation of a novel microbial consortium. Journal of Environmental Science and Health, Part A. 48(13), 1732-1739.
- Jeon YS, Chun J, Kim BS. (2013) Identification of household bacterial community and analysis of species shared with human microbiome. Current Microbiology. 67(5):557-563.
- Ahn KH, Ko KB, Sung BW, Choi JS, Kim BS, Kim KS. (2013) Settling and dewatering characteristics of mixed microorganisms according to changes in the SRT. Desalination and Water Treatment. 51:6201-6209.
- Khodakovskaya M, Kim BS, Kim JN, Alimohammadi M, Dervishi E, Mustafa T, Cerniglia CE. (2013) Carbon nanotubes as plant growth regulators: effects on tomato growth, reproductive system and soil microbial community. Small. 9(1):115-123.
- Kim CT, Kim BS, Kim MJ, Park BH, Kwon S, Maeng HY, Kwak J, Chun J, Cho YJ, Kim N, Kim CJ, Maeng JS. (2012) Draft genome sequencing of Bacillus sp. M2-6, Isolated from the roots of a Korean Ginseng, Panax ginseng C. A. Meyer, after high hydrostatic pressure processing. Journal of Bacteriology. 194 (24):7003-7004.
- Kim JN, Kim BS, Kim SJ, Cerniglia CE. (2012) Effects of Crude oil, Dispersant, and Oil-dispersant mixtures on Human fecal microbiota in an in vitro culture system. mBio. 3(5):00376-12.
- Kim BS, Kim CT, Park BH, Kwon S, Cho YJ, Kim N, Kim CJ, Chun J, Kwak J, Maeng JS. (2012) Draft genome sequencing of Staphylococcus saprophyticus subsp. saprophyticus M1-1, isolated from the Gills of a Korean Rockfish, Sebastes schlegili Hilgendorf, after high hydrostatic pressure processing. Journal of Bacteriology. 194(16):4441-4442.
- Kim BS, Kim JN, Yoon SH, Chun J, Cerniglia CE. (2012) Impact of enrofloxacin on the human intestinal microbiota revealed by comparative molecular analysis. Anaerobe. 18 (3), 310-320.
- Kim DW, Heinze TM, Kim BS, Schnackenberg LK, Woodling KA, Sutherland JB. (2011) Modification of Norfloxacin by a Microbacterium sp. Strain Isolated from a Wastewater Treatment Plant. Applied and Environmental Microbiology. 77(17), 6100-6108.
- Kim BS, Kim JN, Cerniglia CE. (2011) In vitro culture conditions for maintaining a complex population of human gastrointestinal tract microbiota. J Biomed Biotechnol. Vol 2011, 838040.
- Lim YW, Kim BK, Kim C, Jung HS, Kim BS, Lee JH, Chun J. (2010) Assessment of soil fungal communities using pyrosequencing. J. Microbiol. 48(3), 284-289.
- Kim BS, Kim OS, Moon EY, Chun J. (2010) Vitellibacter aestuarii sp. nov., isolated from tidal flat sediment, and an emended description of the genus Vitellibacter. International Journal of Systematic and Evolutionary Microbiology. 60(9), 1989-1992

 

기타

■ 학회할동 
- 한국미생물학회 
- 한국미생물생명공학회 


■ 주요 연구주제 
- 인간미생물체 연구 (Human Microbiome)인간의 몸에는 인간 세포와 유전자수보다 훨씬 많고 다양한 미생물들이 존재하고 있습니다. 이 다양한 미생물들의 구성과 역할을 대용량 염기서열 분석 장비인 Next-Generation Sequencer를 활용한 연구 수행을 통해 밝히고자 합니다. 이를 통해 여러 질병과 미생물 군집의 상관성 연구 및 건강 유지를 위한 응용 방안들을 연구합니다. 밝혀낸 다양한 결과를 산업, 보건학 분야에서 활용 가능하도록 합니다. 
- 미생물 메타지노믹스 연구 (Metagenomics)우리 인간을 포함한 지구상의 모든 환경에는 미생물들이 복잡한 구성을 이루며 공존하고 있습니다. 하지만, 대부분의 미생물들은 실험실에서 배양할 수 없는 종들이 대부분입니다. 환경에 실제 존재하는 미생물들의 구성과 생태적 역할을 메타지노믹스를 활용하여 연구를 합니다. 실제 우리가 생활하고 있는 환경의 미생물 군집의 연구 (Household microbiome) 와 여러 환경의 미생물 군집 연구 (Ecosystem microbiome) 결과를 통해 다양한 환경의 관리 방안에 도움을 주고자 합니다. 
- 미생물 유전체 연구 (Genomics)유익한 미생물 종들과 유해한 미생물 종들의 전유전체 (Whole genome) 분석을 통해 이들의 역할과 진화생태적인 상관성을 연구합니다. 연구를 통해 다양한 유전자 검출법과 유전자 활용 기법을 고안하고자 합니다.